Science Talks for Year 5
|
Date |
Time/Loc |
Speaker |
Title |
Video |
| 07/08/09 |
3:30pm, S360 |
Victor Pinks, Marmion Academy |
"The Computational Microscope" - Integrating Molecular Dynamics Simulations into Laboratory Exercises with OpenMM Zephyr
Abstract |
View Video
Unrestricted Access |
| 06/24-26/09 |
S361 |
Simbios faculty and staff |
MD Workshop series |
More information |
| 06/19/09 |
S361 |
Simbios faculty and staff |
RNA Workshop |
More Information |
| 06/10/09 |
3:30pm, S360 |
Ajay Seth, Stanford |
How do we know what muscles do?
Abstract |
View Video
Restricted Access |
| 06/03/09 |
3:30pm, S360 |
JC Latombe, Stanford University |
Computational Tools to Study Protein Low-Frequency Motions
Abstract |
View Video
Unrestricted Access |
| 05/27/09 |
3:30pm, S360 |
Jesus Izaguirre, Notre Dame |
Simulation of Long Timescale Dynamics of Proteins Using Normal Mode Langevin
Abstract |
View Video
Unrestricted Access |
| 05/20/09 |
4:00pm, Auditorium |
Mark Gerstein, Yale |
This talk is part of the Frontiers in Biological Research series. We will not hold a Simbios seminar that day. |
|
| Monday 05/18/09 |
3:00pm, S363 |
Huan-Xiang Zhou, Florida State University |
Modeling Protein-Protein Interactions: Structure, Thermodynamics, and Kinetics
Abstract |
View Video
Unrestricted Access |
| 05/13/09 |
3:30pm, S360 |
Pat Hanrahan, Stanford University |
Domain Specific Languages for Programming Many-Core Processors (GPUs)
Abstract |
View Video
Restricted Access |
| 04/22/09 |
3:30pm, S360 |
Greg Bowman, Stanford University |
MSMBuilder: Open Source Software for Describing Dynamics with Markov State Models
Abstract |
View Video
Unrestricted Access |
| 04/01/09 |
3:00pm, S360 |
Daniel Herschlag, Stanford University |
Finding and Meeting the Challenges in RNA Folding: A Progress Report
Abstract |
View Video
Restricted Access |
| 03/30/09 (Monday) |
3:00pm,
S360 |
Yun-Dong Wu,
The Hong Kong Univ. of Science & Technology |
A United-Atom Protein Force Field in Coarse-Grained Solvent
Abstract |
|
| 03/18/09 |
3:30pm, S360 |
Jin Yu, UC Berkeley |
Probing the design principle: molecular motor scooting along DNA
Abstract |
View Video
Unrestricted Access |
| 03/11/09 |
3:30pm, S360 |
Martin Stumpe, Stanford University |
De natura denaturantium - On the molecular basis of urea-induced protein denaturation
Abstract |
View Video
Restricted Access |
| 03/04/09 |
3:00pm, S360 |
William Weis, Stanford University |
Crystal structures of the b2-adrenergic receptor
Abstract |
View Video
Restricted Access |
| 02/18/09 |
3:30pm, S360 |
Krishna Shenoy, Stanford University |
Toward High-Performance Cortically-Controlled Prostheses
Abstract |
View Video
Restricted Access |
| 02/12/09 |
5:00pm |
Klaus Schulten, MD Symposium, Keynote address, University of Illinois at Urbana-Champaign |
Biomolecular Modeling with VMD and NAMD accelerated through graphics processing units
Abstract |
View Video
Restricted Access |
| 02/04/09 |
2:30pm, S360 |
Sam Flores, Stanford University |
RNA in Europe
Abstract |
View Video
Unrestricted Access |
| 01/26/09 (Monday) |
3pm, S222 |
Peter Ortoleva, Indiana University |
Multiscale Theory and Simulation of Bionanosystems
Abstract |
|
| 01/28/09 |
3:30pm, S360 |
KC Huang, Stanford University |
Mechanical Determination of Cell Shape in Bacteria
Abstract |
View Video
Restricted Access |
| 01/21/09 |
3:30pm, S360 |
Janelle Bray, Caltech |
GPCR Structure Prediction: Methods and Applications
Abstract |
View Video
Restricted Access |
| 01/14/09 |
3:30pm, S360 |
David Shaw, D. E. Shaw Research and Center for Computational Biology and Bioinformatics, Columbia University |
Anton: A Specialized Machine for
Millisecond-Scale Molecular Dynamics Simulations of Proteins
Abstract |
|
| 12/17/08 |
3:30pm, S361 |
Zev Bryant, Stanford University |
Molecular Motors
Abstract |
View Video
Restricted Access |
| 12/10/08 |
3:30pm, S361 |
Vijay Pande, Stanford University |
How to generate 0.1 seconds of Molecular Dynamics and what can we learn from it
Abstract |
View Video
Restricted Access |
| 12/03/08 |
3:30pm, S361 |
David Parker, Stanford University |
Coarse-grained Modeling of Myosin V Dynamics
Abstract |
View Video
Restricted Access |
| 11/19/08 |
3:30pm, S361 |
Melanie Fox, Stanford University |
Mechanism of improved knee flexion after rectus femoris transfer surgery
Abstract |
View Video
Unrestricted Access |
| 11/17/08 |
3:00pm, S222 |
Kai Kohlhoff, University of Cambridge |
CamShift-MD: A novel computational method to determine protein structure
using NMR chemical shift
Abstract
|
|
| 11/12/08 |
3:30pm, S361 |
Alex Ten Eyck, Stanford University |
Developments in Finite Element Methods for Simulation of Biological Tissues
Abstract |
View Video
Restricted Access |
| 11/05/08 |
3:30pm, S361 |
Mitul Saha , Stanford University |
Automatic Identification of Conserved Domains in cryoEM Maps
Abstract |
View Video
Restricted Access |
| 10/29/08 |
3:30pm, S361 |
Allen Sanderson,
SCI Institute,
University of Utah |
Using GPUs to solve PDEs in Biological Problems
Abstract |
View Video
Unrestricted Access |
| 10/22/08 |
3:30pm, S361 |
Magdalena Jonikas, Stanford University |
An informatics approach to modeling RNA structure
Abstract |
View Video
Unrestricted Access |
| 10/15/08 |
3:30pm, S361 |
Dahlia Weiss, Stanford
University |
Can Morphing Methods Predict Intermediate Structures?
Abstract |
View Video
Unrestricted Access |
| 10/01/08 |
3:30pm, S361 |
Russ Altman,
Scott Delp,
Vijay Pande,
Stanford
University |
Simbios 2.0: Challenges and Opportunities in Physics Based Simulation
Abstract
|
No Video |
| 09/24/08 |
4:00pm, S361 |
Chakra Chennubhotla,
University of Pittsburgh |
Signal Propagation in Proteins and Relation to Equilibrium Fluctuations
Abstract |
View Video
Restricted Access |
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