Download Instructions for the Simbios Molecular Demo
Molecular Dynamics API Accelerated via GPUs
The demo you have just seen showed the significant speed up of molecular dynamics calculations using a GPU as compared to a CPU.
The Molecular Dynamics API will be released on September 1, 2008 at http://simtk.org/home/openmm. You will be able to download the reference code, as well as a version of Gromacs that uses this API and performs traditional CPU computations.
A Gromacs code using this API and running on GPUs will be released December 1, 2008.
If you are interested in early access to the code, contact Dr. Vijay Pande at email@example.com.
Coarse Grained Simulations using SimbodyThe demo you have just seen uses SimTKcore version 1.5 (our Simulation Toolkit), which was released on August 11, 2008.
To run the demo program you will need to:
2) A larger set of example programs, including the above demo program will be made available shortly in the download section of simtk.org/home/simtkcore in preparation for the SimTK 1.5 Workshop.
For general questions please contact the Simbios Director of Dissemination, Dr. Joy Ku, at firstname.lastname@example.org.
Note: These instructions are online at http://simbios.stanford.edu/EventsOfInterest/Demos.htm